You don't need to turn off CE, just those cheats you used previously. Simply unfreze them and restart this fight, then turn ON only those for current fight and turn off again after it.
It's just that most of story mode cheats can break other things in different fights and even menus etc.. You should generally turn on the cheat for story mode only for the fight it's ment to and turn it off after this fight. Yes it's a bother, but that's the only safe use of those cheats and reason I didn't add them to .pnach along with other safer cheats. Other use of story mode cheats can show random untested errors like one you just experienced. The game just store values for different stuff in different adresses for the story mode, not just characters stats that's why it can break stuff and that's why this cheat table is soooo long.
Edit: and I just tried and difficulty doesn't change adresses for those cheats, so it messed up only couse those previous cheats still being ON. Yet I repeat once more, story mode cheats should be used only for fight they're ment for, that's why I sorted those cheats by fights for every saga and soo on.
I was hoping "Make sure to unfreeze before saving to memory card. And generally freeze values only for proper fights." which should be in my cheat tables for story mode directly above first cheats would be enough, but maybe I was a bit unclear that using it differently can cause errors.
It's just that most of story mode cheats can break other things in different fights and even menus etc.. You should generally turn on the cheat for story mode only for the fight it's ment to and turn it off after this fight. Yes it's a bother, but that's the only safe use of those cheats and reason I didn't add them to .pnach along with other safer cheats. Other use of story mode cheats can show random untested errors like one you just experienced. The game just store values for different stuff in different adresses for the story mode, not just characters stats that's why it can break stuff and that's why this cheat table is soooo long.
Edit: and I just tried and difficulty doesn't change adresses for those cheats, so it messed up only couse those previous cheats still being ON. Yet I repeat once more, story mode cheats should be used only for fight they're ment for, that's why I sorted those cheats by fights for every saga and soo on.
I was hoping "Make sure to unfreeze before saving to memory card. And generally freeze values only for proper fights." which should be in my cheat tables for story mode directly above first cheats would be enough, but maybe I was a bit unclear that using it differently can cause errors.